JOURNAL OF LIGHT INDUSTRY

CN 41-1437/TS  ISSN 2096-1553

分子生物学技术在堆肥微生物研究中的应用综述

张蔓 魏明宝 马闯 张宏忠 赵继红

张蔓, 魏明宝, 马闯, 等. 分子生物学技术在堆肥微生物研究中的应用综述[J]. 轻工学报, 2013, 28(3): 13-19. doi: 10.3969/j.issn.2095-476X.2013.03.004
引用本文: 张蔓, 魏明宝, 马闯, 等. 分子生物学技术在堆肥微生物研究中的应用综述[J]. 轻工学报, 2013, 28(3): 13-19. doi: 10.3969/j.issn.2095-476X.2013.03.004
ZHANG Man, WEI Ming-bao, MA Chuang, et al. Review of application of molecular biotechnology in compost microorganism research[J]. Journal of Light Industry, 2013, 28(3): 13-19. doi: 10.3969/j.issn.2095-476X.2013.03.004
Citation: ZHANG Man, WEI Ming-bao, MA Chuang, et al. Review of application of molecular biotechnology in compost microorganism research[J]. Journal of Light Industry, 2013, 28(3): 13-19. doi: 10.3969/j.issn.2095-476X.2013.03.004

分子生物学技术在堆肥微生物研究中的应用综述

  • 基金项目: 河南省重大公益项目(101100910300)
    国家水体污染控制与治理科技重大专项子课题(2012ZX07204-001)

  • 中图分类号: Q71;Q75;Q785

Review of application of molecular biotechnology in compost microorganism research

  • Received Date: 2013-03-26
    Available Online: 2013-05-15

    CLC number: Q71;Q75;Q785

  • 摘要: 对常用的16S/18S rRNA/DNA序列分析、变性梯度凝胶电泳、DNA单链构象多态性分析、限制性片段长度多态性分析、随机扩增多态性DNA分析、扩增的限制性片段长度多态性分析等分子生物学技术的特点及其在堆肥微生物研究中的应用进行了述评,提出堆肥微生物研究应结合传统的分离培养方法,多种技术互补使用,以便取得更科学的结果.
    1. [1]

      Zhu N,Deng C,Xiong Y,et al.Performance characteristics of three aeration systems in the swine manure composting[J].Bioresource Technology,2004,95(3):319.

    2. [2]

      韦元雅,宋鹏,陈五岭,等.堆肥法处理城市有机垃圾研究综述[J].上海环境科学,2008,27(5):214.

    3. [3]

      Partanen P,Hultman J,Paulin L,et al.Bacterial diversity at different stages of the composting process[J].BMC Microbiology,2010,10(1):94.

    4. [4]

      王伟东,王小芬,朴哲,等.堆肥化过程中微生物群落的动态[J].环境科学,2007,28(11):2591.

    5. [5]

      顾文杰,张发宝,徐培智,等.复合微生物菌剂对市政污泥堆肥中有机物质的影响[J].广东农业科学,2011(12):71.

    6. [6]

      王玉军,窦森,崔俊涛,等.复合菌剂对农业废弃物堆肥过程中理化指标变化的影响[J].农业环境科学学报,2006,25(5):1354.

    7. [7]

      徐智,张陇利,张发宝,等.堆肥反应器中2种微生物接种剂的堆肥效果研究[J].环境科学,2009,30(11):3409.

    8. [8]

      Xi B D,Liu H L,Zeng G M,et al.Composting MSW and sewage sludge with effective complex microorganisms[J].Journal of Environmental Sciences,2002,14(2):264.

    9. [9]

      Howeler M,Ghiorse W C,Walker L P.A quantitative an-alysis of DNA extraction and purification from compost[J].Journal of Microbiological Methods,2003,54(1):37.

    10. [10]

      张洪勋,王晓谊,齐鸿雁.微生物生态学研究方法进展[J].生态学报,2003,23(5):988.

    11. [11]

      Amann R I,Ludwig W,Schleifer K H.Phylogenetic iden-tification and in situ detection of individual microbial cells without cultivation[J].Microbiological Reviews,1995,59(1):143.

    12. [12]

      Vaz-moreira I,Egas C,Nunes O C,et al.Culture-dependent and culture-independent diversity surveys target different bacteria:A case study in a freshwater sample[J].Antonie Van Leeuwenhoek,2011,100(2):245.

    13. [13]

      曾光明,黄国和.堆肥环境生物与控制[M].北京:科学出版社,2006.

    14. [14]

      Woese C R,Gutell R,Gupta R,et al.Detailed analysis of the higher-order structure of 16S-like ribosomal ribonucleic acids[J].Microbiological Reviews,1983,47(4):621.

    15. [15]

      Muyzer G,De Waal E C,Uitterlinden A G.Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA[J].Applied and Environmental Microbiology,1993,59(3):695.

    16. [16]

      牛俊玲,高军侠,李彦明,等.堆肥过程中的微生物研究进展[J].中国生态农业学报,2007,15(6):185.

    17. [17]

      屠腾,李蕾,毛冠男,等.利用细胞计数手段和DGGE技术分析松花江干流部分地区的细菌种群多样性[J].生态学报,2012,32(11):3505.

    18. [18]

      孙庆华,柏耀辉,赵翠,等.DGGE,T-RFLP,LH-PCR对两种活性污泥的微生物种群多样性分析的比较[J].环境工程学报,2009,3(8):1365.

    19. [19]

      王华金,朱能武,李冲,等.微生物燃料电池阳极生物膜微生物群落的PCR-DGGE分析[J].农业环境科学学报,2012,31(7):1431.

    20. [20]

      吕新,陈丽华,李玥仁.4种不同土壤微生物DNA提取方法对DGGE分析微生物群落的影响[J].福建农业学报,2012,27(4):367.

    21. [21]

      Cherif H,Ayari F,Ouzari H,et al.Effects of municipal solid waste compost,farmyard manure and chemical fertilizers on wheat growth,soil composition and soil bacterial characteristics under Tunisian arid climate[J].European Journal of Soil Biology,2009,45(2):138.

    22. [22]

      Muyzer G.DGGE/TGGE a method for identifying genes from natural ecosystems[J].Current Opinion in Microbiology,1999,2(3):317.

    23. [23]

      Bonito G,Isikhuemhen O S,Vilgalys R.Identification of fungi associated with municipal compost using DNA-based techniques[J].Bioresource Technology,2010,101(3):1021.

    24. [24]

      Hansgate A M,Schloss P D,Hay A G,et al.Molecular characterization of fungal community dynamics in the initial stages of composting[J].FEMS Microbiology Ecology,2006,51(2):209.

    25. [25]

      Calli B,Mertoglu B,Roest K,et al.Comparison of long-term performances and final microbial compositions of anaerobic reactors treating landfill leachate[J].Bioresource Technology,2006,97(4):641.

    26. [26]

      Wang G H,Jin J,Liu J J,et al.Bacterial community structure in a Mollisol under long-term natural restoration,cropping and bare fallow history estimated by PCR-DGGE[J].Pedosphere,2009,19(2):156.

    27. [27]

      党秋玲,李鸣晓,席北斗,等.堆肥过程多阶段强化接种对细菌群落多样性的影响[J].环境科学,2011,32(9):2689.

    28. [28]

      叶凝芳,吕凡,何晶晶,等.DGGE和SSCP解析蔬菜类废物好氧降解过程细菌群落结构及演替的比较[J].农业环境科学学报,2007,26(3):1132.

    29. [29]

      王爱杰,任南琪.环境中的分子生物学诊断技术[M].北京:化学工业出版社,2004.

    30. [30]

      Botstein D,White R L,Skolnick M,et al.Construction of a genetic linkage map in man using restriction fragment length polymorphisms[J].American Journal of Human Genetics,1980,32(3):314.

    31. [31]

      Orita M,Iwahana H,Kanazawa H,et al.Detection of polymorphisms of human DNA by gel electrophoresis as single-strand conformation polymorphisms[J].Proceedings of the National Academy of Sciences,1989,86(8):2766.

    32. [32]

      Lee D H,Zo Y G,Kim S J.Nonradioactive method to study genetic profiles of natural bacterial communities by PCR-single-strand-conformation polymorphism[J].Applied and Environmental Microbiology,1996,62(9):3112.

    33. [33]

      Schwieger F,Tebbe C C.A new approach to utilize PCR-single-strand-conformation polymorphism for 16S rRNA gene-based microbial community analysis[J].Applied and Environmental Microbiology,1998,64(12):4870.

    34. [34]

      米文秀,谢冰,徐亚同.PCR-SSCP技术用于脱臭微生物群落结构的研究[J].环境科学,2008,29(7):1992.

    35. [35]

      章戴荣.利用PCR-SSCP技术分析猪粪堆肥微生物群落动态[D].成都:四川农业大学,2007.

    36. [36]

      Abid N,Chamkha M,Godon J,et al.Involvement of microbial populations during the composting of olive mill wastewater sludge[J].Environmental Technology,2007,28(7):751.

    37. [37]

      Duthoit F,Godon J J,Montel M C.Bacterial community dynamics during production of registered designation of origin Salers cheese as evaluated by 16S rRNA gene single-strand conformation polymorphism analysis[J].Applied and Environmental Microbiology,2003,69(7):3840.

    38. [38]

      Sliwinski M K,Goodman R M.Spatial heterogeneity of crenarchaeal assemblages within mesophilic soil ecosystems as revealed by PCR-single-stranded conformation polymorphism profiling[J].Applied and Environmental Microbiology,2004,70(3):1811.

    39. [39]

      喻曼,许育新,曾光明,等.RFLP法研究接种对农业废物堆肥微生物多样性的影响[J].农业环境科学学报,2010,29(2):396.

    40. [40]

      Bauchan G R,Campbell T A,Hossain M A.Comparative chromosome banding studies of nondormant alfalfa germplasm[J].Crop Science,2003,43(6):2037.

    41. [41]

      Isobe S,Klimenko I,Ivashuta S,et al.First RFLP linkage map of red clover (Trifolium pratense L.) based on cDNA probes and its transferability to other red clover germplasm[J].Theoretical and Applied Genetics,2003,108(1):105.

    42. [42]

      Ekuere U,Dosdall L,Hills M,et al.Identification,mapping and economic evaluation of QTLs encoding root maggot resistance in[J].Crop Science,2005,45(1):371.

    43. [43]

      Pesaro M,Widmer F.Identification and specific detection of a novel Pseudomonadaceae cluster associated with soils from winter wheat plots of a long-term agricultural field experiment[J].Applied and Environmental Microbiology,2006,72(1):37.

    44. [44]

      陈金华,王中康,贺闽,等.DGGE和RFLP方法分析桑粒肩天牛幼虫肠道微生物多样性[J].生物技术通报,2008(6):115.

    45. [45]

      Schütte U M E,Abdo Z,Bent S J,et al.Advances in the use of terminal restriction fragment length polymorphism(T-RFLP) analysis of 16S rRNA genes to characterize microbial communities[J].Applied Microbiology and Biotechnology,2008,80(3):365.

    46. [46]

      徐哓飞,林炜铁,彭智辉,等.RAPD技术及其在微生物学方面的应用[J].生命的化学,2001(5):436.

    47. [47]

      Abbasi P A,Miller S A,Meulia T,et al.Precise detection and tracing of Trichoderma hamatum 382 in compost-amended potting mixes by using molecular markers[J].Applied and Environmental Microbiology,1999,65(12):5421.

    48. [48]

      陈杰娥,贾晓珊,徐昕荣.应用RAPD方法分析厌氧氨氧化污泥驯化过程中的微生物遗传性质[J].环境科学学报,2007,27(6):961.

    49. [49]

      王世伟,齐小辉,刘军,等.AFLP技术在微生物分类鉴定、基因标定及遗传多样性方面的应用[J].生物技术,2003,13(5):42.

    50. [50]

      Velappan N,Snodgrass J L,Hakovirta J R,et al.Rapid identification of pathogenic bacteria by single-enzyme amplified fragment length polymorphism analysis[J].Diagnostic microbiology and infectious disease,2001,39(2):77.

    51. [51]

      Zhong S,Steffenson B.Identification and characterization of DNA markers associated with a locus conferring virulence on barley in the plant pathogenic fungus Cochliobolus sativus[J].Theoretical and Applied Genetics,2002,104(6-7):1049.

    52. [52]

      何月秋,Leung H,Zeigler R S,等.稻瘟病菌变异菌株的AFLP分析[J].菌物系统,2002,21(3):363.

    53. [53]

      冯瑞华.用AFLP技术和16S rDNA PCR-RFLP分析毛苜蓿根瘤菌的遗传多样性[J].微生物学报,2000,40(4):339.

    54. [54]

      刘国传,陆琳,汪琳,等.致病微生物检测生物芯片图像去噪方法的研究[J].仪器仪表学报,2009,30(2):351.

    55. [55]

      高兴,王景林.基因芯片技术在病原细菌检测中的应用[J].中国生物工程杂志,2010,30(2):100.

    56. [56]

      朱海霞.FCM检测低能N+注入对活性污泥微生物菌群的影响[D].郑州:郑州大学,2007.

    57. [57]

      Zilles J L,Peccia J,Noguera D R.Microbiology of enhanced biological phosphorus removal in aerated-anoxic orbal processes[J].Water Environment Research,2002,74(5):428.

  • 加载中
计量
  • PDF下载量:  24
  • 文章访问数:  1079
  • 引证文献数: 0
文章相关
  • 收稿日期:  2013-03-26
  • 刊出日期:  2013-05-15
通讯作者: 陈斌, bchen63@163.com
  • 1. 

    沈阳化工大学材料科学与工程学院 沈阳 110142

  1. 本站搜索
  2. 百度学术搜索
  3. 万方数据库搜索
  4. CNKI搜索
张蔓, 魏明宝, 马闯, 等. 分子生物学技术在堆肥微生物研究中的应用综述[J]. 轻工学报, 2013, 28(3): 13-19. doi: 10.3969/j.issn.2095-476X.2013.03.004
引用本文: 张蔓, 魏明宝, 马闯, 等. 分子生物学技术在堆肥微生物研究中的应用综述[J]. 轻工学报, 2013, 28(3): 13-19. doi: 10.3969/j.issn.2095-476X.2013.03.004
ZHANG Man, WEI Ming-bao, MA Chuang, et al. Review of application of molecular biotechnology in compost microorganism research[J]. Journal of Light Industry, 2013, 28(3): 13-19. doi: 10.3969/j.issn.2095-476X.2013.03.004
Citation: ZHANG Man, WEI Ming-bao, MA Chuang, et al. Review of application of molecular biotechnology in compost microorganism research[J]. Journal of Light Industry, 2013, 28(3): 13-19. doi: 10.3969/j.issn.2095-476X.2013.03.004

分子生物学技术在堆肥微生物研究中的应用综述

  • 郑州轻工业学院 材料与化学工程学院, 河南 郑州 450001;
  • 河南省表界面科学重点实验室, 河南 郑州 450001
基金项目:  河南省重大公益项目(101100910300)国家水体污染控制与治理科技重大专项子课题(2012ZX07204-001)

摘要: 对常用的16S/18S rRNA/DNA序列分析、变性梯度凝胶电泳、DNA单链构象多态性分析、限制性片段长度多态性分析、随机扩增多态性DNA分析、扩增的限制性片段长度多态性分析等分子生物学技术的特点及其在堆肥微生物研究中的应用进行了述评,提出堆肥微生物研究应结合传统的分离培养方法,多种技术互补使用,以便取得更科学的结果.

English Abstract

参考文献 (57)

目录

/

返回文章