Study on an extraction method of pathogenic fungal DNA from farmland soil

Abstract

Keywords:
• farmland soil,
• pathogenic fungi,
• DNA extraction,
• PCR amplification

References

1. [1]

   Vigdis T,Lise O.Microbial diversity and function in soil:from genes to ecosystems[J].Ecology and Industrial Microbiology,2002(5):240.

2. [2]

   Bertrand H,Poly F,Van V T,et al.High molecular weight DNA recovery from soils prerequisite for biotechnological metagenomic library construction[J].Journal of Microbiological Methods,2005(62):1.

3. [3]

   Thakuria D,Schmidt O,Siurtain M M.Importance of DNA quality in comparative soil microbial community structure analyses[J].Soil Biology & Biochemistry,2008(40):1390.

4. [4]

   吴敏娜,张惠文,李新宇,等.提取北方土壤真菌DNA的一种方法[J].生态学杂志,2007,26(4):611.
   

5. [5]

   Kirk J L,Beaudette L A,Hart M,et al.Methods of studying soil microbial diversity[J].Journal of Microbiological Methods,2004(58):169.

6. [6]

   Sessitsch,Hackl E,Wenzl P,et al.Diagnostic microbial microarrays in soil ecology[J].New Phytologist,2006(171):719.

7. [7]

   Cao C,Yang M, Xu X J,et al.Technologies of extraction and purification of microbial total DNA from a meadow soil[C]//Remote Sensing Environment and Transportation Engineering (RSETE),Nanjing:IEEE,2011:7215-7218.

8. [8]

   Smalla K, Cresswell N, Mendonca Hagler L C,et al.Rapid DNA extraction protocol from soil for polymerase chain reaction mediated amplification[J].J Appl Microbiol,1993,74(1):78.

9. [9]

   Miller D N,Bryant J E,Madsen E L,et al. Evaluation and optimization of DNA extraction and purification procedures for soil and sediment samples[J].Appl Environ Microbiol, 1999, 65(47):15.

10. [10]

    Volossiork T,Jane Robb E,Nazar Ross N.Direct DNA extraction for PCR-mediated assays of soil organisms[J].Appl Environ Microbiol,1995,61(11):3972.

11. [11]

    Agnelli A,Ascher J,Corti G,et al.Distribution of microbial communities in a forest soil profile investigated by microbial biomass soil respiration and DGGE of total and extracellular DNA[J].Soil Biology & Biochemistry, 2004, 36:859.

12. [12]

    Hawksworth D L, Rossman A Y.Where are all the undescribed fungi?[J].Phytopathology,1997(87):888.

13. [13]

    Lamontagne M G, MichelJr F C. Evaluation of extraction and purification methods for obtaining PCR-amplifiable DNA from compost for microbial community analysis[J].Journal of Microbiological Methods,2002,49:255.

14. [14]

    Zhang Z,Zhang J,Wang Y,et al. Molecular detection of Fusarium oxysporum f. sp. niveum and Mycosphaerella melonis in infected plant tissues and soil[J].FEMS Microbiology Letters,2005,249:39.

15. [15]

    张瑞福,曹慧,崔中利,等.土壤微生物总DNA的提取和纯化[J].微生物学报,2003,43(2):276.
    

16. [16]

    Zhou J,Bruns M A,Tiedie J M.DNA recovery from soils of diverse composition[J].Appl Environ Microbiol,1996,62(4):326.

Proportional views